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Tutorial Introduction This tutorial with help you learn what makes Twease different and how Twease can help you find what you are looking for, fast. Twease is a web-based tool to search Medline® abstracts. Twease indexes each word of Medline® and provides features that can transparently expand your search to help find the information you are looking for. Twease searches are also partially case sensitive. Short terms are case sensitive, while longer terms are not. For instance, TnT is different from TNT (TnT often stands for Troponin T while TNT often stands for trinitrotoluene). For more details on Twease's case sensitivity, see the Case Sensitive Searches tutorial page. Finally, Twease can automatically discover common abbreviations for search phrases (e.g., "protein kinase C" will discover PKC, PK-C, aPKC, etc.) and rewrite queries to use these abbreviations. This feature is available through the Slider (on the top right) and the Advanced pane. To learn more about searching Twease, visit the rest of this tutorial.
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pmid-list:15385024,10477428,12644737,9151330,7668324,1609835,7668325,11830536,10500178,8412021,17090516,7171758,8288252,7668331,2249854,2249855,8314582,9151311,9151312,9804285,16941499,16087292,9151319,16515873,11988019,9151324,9151325,8105141,9753630,10329028,9151332,953200,9311735,4810892,7887420,17475770,1535179,17963751,15991331,7999068,9392580,8411973,10916181,17341489,1635301,7668357,7110772,10740217,11980063,8279474,18314010,9151318,12633880,15075260,9061571,10069573,6662001,11921051,7484216,7830067,17101785,10440905,12909364,2399809,11588977,11588978,8666398,2805379,17482562,9490299,11588987,11588988,9119403,15701790,8786815,8786816,8812718,9039656,9645099,15010464,8812504,11589003,15471887,10356317,1138683,9949212,11589015,15094366,841336,7770121,16610769,2486153,7613514,12559844,854361,8833154,8577058,14997939,15032383,15818814
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Query Results 1 - 20 of 100
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batten[99], disease[100], the[93], and[86], in[90], of[91], a[86]
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15385024
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Anesthesia in a child with batten disease. (2004 Sep)
anesthesia in a child with batten disease .
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10477428
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Molecular basis of the neuronal ceroid lipofuscinoses : mutations in CLN1 , CLN2 , CLN3 , and CLN5. (1999 Oct)
molecular basis of the neuronal ceroid lipofuscinoses : mutations in CLN1 , CLN2 , CLN3 , and CLN5 . The neuronal ceroid lipofuscinoses ( NCLs ) , also referred to as batten disease , are a group of neurodegenerative disorders characterised by the accumulation of an autofluorescent lipopigment in many cell types . different NCL types are distinguished according to age of onset , clinical phenotype , ultrastructural characterisation of the storage material , and chromosomal location of the disease gene . At least eight genes underlie the NCLs , of which four have been isolated and mutations characterised : CLN1 , CLN2 , CLN3 , CLN5 . Two of these genes encode lysosomal enzymes , and two encode transmembrane proteins , at least one of which is likely to be in the lysosomal membrane . The basic defect in the NCLs appears to be associated with lysosomal function .
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12644737
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Progress towards understanding the neurobiology of batten disease or neuronal ceroid lipofuscinosis. (2003 Mar)
progress towards understanding the neurobiology of batten disease or neuronal ceroid lipofuscinosis . purpose OF review : The identification of genes mutated in the neuronal ceroid lipofuscinoses has accelerated research into the mechanisms that underlie these fatal autosomal recessive storage disorders , which are often referred to as batten disease . This review summarizes progress in this field since october 2001 , describing advances in cell biology , the characterization of new animal models of neuronal ceroid lipofuscinosis , and the impact of novel methodology to reveal insights into its pathogenesis . recent findings : Gene products for six of the eight forms of neuronal ceroid lipofuscinosis have now been discovered , and concerted efforts are underway to understand the normal biology of each gene product and how this may be altered by mutation . several lines of evidence point to functions for the CLN genes in the endosomal lysosomal system , and suggest neuron specific roles for these proteins . indeed , a requirement for appropriate protein trafficking within neurons may explain the profound and selective effects of these disorders upon the central nervous system . The development of mouse and large animal models has enabled comparative studies of the progressive effects of disease , including characterization by morphological and biochemical means supplemented by metabonomic and microarray techniques . summary : insights into disease mechanisms are building a detailed profile of the impact of neuronal ceroid lipofuscinosis upon the brain . With the eventual aim of developing successful therapeutic …
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9151330
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The value of positron emission tomography in the diagnosis and monitoring of late infantile and juvenile lipopigment storage disorders ( … (1997 Aug)
The value of positron emission tomography in the diagnosis and monitoring of late infantile and juvenile lipopigment storage disorders ( so called batten or neuronal ceroid lipofuscinoses ) . positron emission tomography ( PET ) with 2 deoxy 2 18F fluoro D glucose provides a measure of functional brain activity , particularly in the dendritic field . In CLN3 ( juvenile neuronal ceroid lipofuscinosis or juvenile batten disease , with fingerprint inclusions ) hypometabolism slowly spreads from calcarine to anterior areas , sparing subcortical structures and brainstem . In CLN2 ( late infantile neuronal ceroid lipofuscinosis or jansky bielschowsky disease , with curvilinear inclusions ) degeneration is rapid with generalized cortical and subcortical hypometabolism . This is associated with rapidly progressive cerebral atrophy on anatomical neuroimaging . A 4 year old child with CLN2 scanned with PET 13 months after the clinical onset showed hypometabolism , severe in the thalamus and mild in cortical areas . three other patients with CLN2 had severe generalized hypometabolism and brain atrophy . longitudinal PET studies in CLN may provide key insights into degenerative processes .
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7668324
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Translocation 10 ; 18 in a patient with juvenile neuronal ceroid lipofuscinosis ( batten disease ). (1995 Oct)
translocation 10 ; 18 in a patient with juvenile neuronal ceroid lipofuscinosis ( batten disease ) . We report the first observation of a chromosome abnormality in a patient with typical juvenile ceroid lipofuscinosis ( NCL ) , who was found to have an apparently balanced translocation between chromosomes 10 and 18 t ( 10 ; 18 ) ( q22 . 1 ; q21 . 1 ) . since juvenile NCL was previously mapped to 16p12 , this report raises the possibility of heterogeneity in this form of NCL .
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1609835
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Linkage analysis in juvenile neuronal ceroid lipofuscinosis. (1992 Jul)
linkage analysis in juvenile neuronal ceroid lipofuscinosis . neuronal ceroid lipofuscinosis ( NCL , batten disease ) is an autosomal recessive disease characterized by progressive mental retardation , cortical atrophy , seizures , and retinal degeneration . several subtypes have been delineated on the basis of age at onset and histological characteristics ; the most common is the juvenile ( JNCL ) form . recently , the gene for JNCL was shown to reside on chromosome 16 through linkage studies to the haptoglobin locus and anonymous DNA markers using numerous european families . We have now examined 8 families from north america with JNCL for linkage to markers in 16q21 23 . results in 3 families tend to support linkage to chromosome 16 ; 3 families remained uninformative , and 2 families produced negative lod scores in this region . A test of homogeneity was suggestive , but could not significantly reject the null hypothesis of homogeneity . We are continuing to collect families , particularly those with multiple living affecteds , and are identifying other probes in this region . given close localization on chromosome 16 for JNCL , molecular strategies , including candidate gene strategies , are being explored .
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7668325
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Tissue and cellular distribution of subunit c of ATP synthase in batten disease ( neuronal ceroid lipofuscinosis ). (1995 Oct)
tissue and cellular distribution of subunit c of ATP synthase in batten disease ( neuronal ceroid lipofuscinosis ) . The major protein component of the storage bodies in the late infantile ( LIB ) and juvenile ( JB ) forms of batten diseases is subunit c of ATP synthase ( subunit c ) . ultrastructurally the stored material may appear as curvilinear bodies , fingerprint profiles , or a mixture of both , dependent upon the form of batten disease and the cell type . The mnd / mnd mouse , an animal model for batten disease , also stores subunit c and has loosely stacked lamellae within the neurons of the brain and in other cells and tissues . using a range of tissue samples , immunolocalization , using avidin biotin techniques at the LM level and postembedding immunogold labelling ( 5 nm ) with silver enhancement at the EM level , were used to investigate specific subunit c immunoreactivity . subunit c storage was displayed in a number of cells , including neurons , muscle cells , adipocytes , macrophages , endothelial and some epithelial cells , and exocrine and endocrine cells . By EM , subunit c was localized to all curvilinear type storage bodies , but to nowhere else within the cell . It was not present over fingerprint profiles , the characteristic storage pattern of neurons within the JB gut , possibly due to steric factors . preliminary studies in the mnd mouse showed subunit …
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11830536
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The CLN3 gene is a novel molecular target for cancer drug discovery. (2002 Feb)
The CLN3 gene is a novel molecular target for cancer drug discovery . juvenile batten disease is a neurodegenerative disease caused by accelerated apoptotic death of photoreceptors and neurons attributable to defects in the CLN3 gene . CLN3 is antiapoptotic when overexpressed in NT2 neuronal precursor cells . CLN3 negatively modulates endogenous ceramide levels in NT2 cells and acts upstream of ceramide generation . because defects in regulation of apoptosis are involved in the development of cancer , we evaluated the expression of CLN3 on both mRNA and protein levels in a variety of cancer cell lines and solid colon cancer tissue . We also observed the effect of the blocking of CLN3 protein expression on cancer cell growth , survival , ceramide production , and apoptosis by using an adenovirus bearing antisense CLN3 construct . We show that CLN3 mRNA and protein are overexpressed in glioblastoma ( U 373G and T98g ) , neuroblastoma ( IMR 32 and SK N MC ) , prostate ( du145 , PC 3 , and lncap ) , ovarian ( SK OV 3 , sw626 , and PA 1 ) , breast ( BT 20 , BT 549 , and BT 474 ) , and colon ( sw1116 , sw480 , and HCT 116 ) cancer cell lines but not in pancreatic ( capan and As PC 1 ) or lung ( A 549 and NCI H520 ) cancer cell lines . CLN3 is also up regulated in mouse melanoma and breast carcinoma …
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10500178
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Phenotypic reversal of the btn1 defects in yeast by chloroquine : a yeast model for batten disease. (1999 Oct)
phenotypic reversal of the btn1 defects in yeast by chloroquine : a yeast model for batten disease . BTN1 of saccharomyces cerevisiae encodes an ortholog of CLN3 , the human batten disease gene . We have reported previously that deletion of BTN1 , btn1 delta , resulted in a pH dependent resistance to D ( ) threo 2 amino 1 p nitrophenyl 1 , 3 propanediol ( ANP ) . This phenotype was caused by btn1 delta strains having an elevated ability to acidify growth medium through an elevated activity of the plasma membrane H ( ) atpase , resulting from a decreased vacuolar pH during early growth . We have determined that growing btn1 delta strains in the presence of chloroquine reverses the resistance to ANP , decreases the rate of medium acidification , decreases the activity of plasma membrane H ( ) atpase , and elevates vacuolar pH . however , an additional effect of this phenotypic reversal is that activity of plasma membrane H ( ) atpase is decreased further and vacuolar pH is increased further as btn1 delta strains continue to grow . This phenotypic reversal of btn1 delta can be considered for developing a therapy for batten disease .
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8412021
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Genetic analysis of batten disease. (1993 Nov)
genetic analysis of batten disease . batten disease , or neuronal ceroid lipofuscinosis ( CLN ) comprises a group of inherited neurodegenerative disorders characterized by the accumulation of autofluorescent lipopigment in neurones . The three main childhood varieties infantile ( CLN1 ) , late infantile ( CLN2 ) and juvenile ( CLN3 ) manifest autosomal recessive inheritance . The basic biochemical defect remains unknown . The strategy of positional cloning is being pursued to elucidate the molecular basis of batten disease . The infantile disease locus ( CLN1 ) has been mapped by linkage analysis to human chromosome 1p32 , and the juvenile disease locus ( CLN3 ) to human chromosome 16p12 . In each case marker loci in strong linkage disequilibrium with the disease loci have been identified . locus heterogeneity between classical late infantile CLN ( CLN2 ) and both CLN1 and CLN3 has been demonstrated . Work is in progress to clone CLN1 and CLN3 and to map CLN2 . identification of linked markers has provided a new approach to prenatal diagnosis . The methodology exists for positional cloning of these genes and elucidation of the molecular genetic basis of the ceroid lipofuscinoses .
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17090516
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Diagnosis of neuronal ceroid lipofuscinosis ( batten disease ) by electron microscopy in peripheral blood specimens. (2006 Nov)
diagnosis of neuronal ceroid lipofuscinosis ( batten disease ) by electron microscopy in peripheral blood specimens . neuronal ceroid lipopofuscinosis ( batten disease , NCL ) represents a group of common childhood neurodegenerative diseases with a shared feature of deposition of abnormal metabolic products in neurons and other tissues , including peripheral blood lymphocytes . In most forms of NCL no specific enzyme defect is known and the diagnosis relies primarily on ultrastructural identification of characteristic membrane bound inclusions containing the abnormal metabolic product . All buffy coat specimens examined during a 7 year period ( 1997 2004 ) for the exclusion or confirmation of the diagnosis NCL were reviewed . From a total of 265 samples , 9 were inadequate and NCL was diagnosed in 56 . Five showed granular osmophilic deposits of infantile batten disease ( NCL1 ) , 10 showed curvilinear profiles of classical late infantile batten disease ( NCL2 ) , and 17 showed vacuolated lymphocytes with fingerprint profiles , indicating classical juvenile batten disease ( NCL3 ) . 24 samples ( 43 ) demonstrated compact electron dense deposits with fingerprint profiles in the absence of vacuolated lymphocytes , indicative of variant forms NCL . ultrastructual examination of peripheral blood allows reliable and specific diagnosis of subtypes of batten disease , including variants , and is a useful , minimally invasive test for the diagnosis of NCL in childhood .
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7171758
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Batten disease : new research findings on the biochemical defect. (1983 Feb)
batten disease : new research findings on the biochemical defect .
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8288252
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Mapping of the phenol sulfotransferase gene ( STP ) to human chromosome 16p12. (1994 Feb)
mapping of the phenol sulfotransferase gene ( STP ) to human chromosome 16p12 . 1 p11 . 2 and to mouse chromosome 7 . We have recently cloned a cDNA encoding the human phenol preferring phenol sulfotransferase ( P PST ) enzyme . An oligonucleotide primer pair based on the human STP ( representing sulfotransferase , phenol preferring ) cDNA sequence was synthesized and was employed in polymerase chain reaction ( PCR ) amplification of human genomic DNA to identify a 525 bp DNA fragment . The DNA sequence of this portion of the STP gene , near the 5 end of the coding region , was determined . The amplified genomic fragment contained two small introns of 104 and 89 bp . When DNA samples from a human hamster somatic cell hybrid panel were screened by PCR using these primers , only those hybrids that contained human chromosome 16 were positive for the 525 bp genomic fragment . To identify the specific region on chromosome 16 that contained the STP gene , PCR amplification reactions were performed on a human mouse somatic cell hybrid panel containing defined portions of human chromosome 16 . The results indicated that STP is localized proximal to the gene for protein kinase C , beta 1 polypeptide ( prkcb1 ) , in the region from the distal portion of 16p11 . 2 to p12 . 1 . The human STP gene maps near the locus for batten disease ( CLN3 ) . furthermore , …
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7668331
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Morphological alterations in neocortical and cerebellar gabaergic neurons in a canine model of juvenile batten disease. (1995 Oct)
morphological alterations in neocortical and cerebellar gabaergic neurons in a canine model of juvenile batten disease . The pathogenesis of brain dysfunction in a canine model of juvenile batten disease was studied with techniques designed to determine sequential changes in mitochondrial morphology and cytochrome oxidase ( CO ) activity , and in neurons and synapses using gamma aminobutyric acid ( GABA ) as a neurotransmitter . histochemical and immunocytochemical methods were employed . mitochondrial alterations were found in a select population of nonpyramidal neurons in neocortex and claustrum , and in cerebellar basket cells . proportions of affected neurons at any one time remained constant over the disease course , with morphologically abnormal mitochondria first being recognized at age 6 months . enlarged mitochondria were readily identifiable at the light microscope ( LM ) level as large CO positive or mitochondrial antibody positive granular structures . colabelling with antibodies to GABA or to parvalbumin ( PV ) indicated that most of these cells were gabaergic . ultrastructurally , atypical mitochondria were characterized by globular enlargement , intramitochondrial membranous inclusions , and disorganized internal structure . CO activity in all other cell somata and in neuropil was diminished compared with normal , age matched tissue . glutamic acid decarboxylase ( GAD ) , PV , and GABA studies demonstrated loss of gabaergic neurons and synapses in cortex and cerebellum of affected dogs . these results indicate that abnormal mitochondria are present in neurons in batten disease , and suggest that suboptimal …
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2249854
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Batten disease ( spielmeyer Vogt disease , juvenile onset neuronal ceroid lipofuscinosis ) gene ( CLN3 ) maps to human … (1991 Jan)
batten disease ( spielmeyer Vogt disease , juvenile onset neuronal ceroid lipofuscinosis ) gene ( CLN3 ) maps to human chromosome 16 . The ceroid lipofuscinoses are a group of inherited neurodegenerative disorders characterized by the accumulation of autofluorescent lipopigment in neurons and other cell types . The underlying biochemical defect is unknown . batten disease ( spielmeyer Vogt disease , juvenile onset neuronal ceroid lipofuscinosis ) displays autosomal recessive inheritance . genetic linkage studies were undertaken to determine the chromosomal location of the batten disease mutation ( CLN3 ) . following identification of linkage to the haptoglobin locus , linkage analysis has been carried out in 42 families by using DNA markers for loci on the long arm of human chromosome 16 . The maximal lod score between batten disease and the locus d16s148 calculated for combined sexes is 6 . 05 at a recombination fraction theta 0 . 00 . multilocus analysis using five loci indicated the most likely order to be HP d16s151 d16s150 CLN3 d16s148 d16s147 . The maximal location score for CLN3 was 48 ( equivalent to a lod score of 10 . 4 ) in that interval within this fixed marker map .
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2249855
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Infantile neuronal ceroid lipofuscinosis is not an allelic form of batten disease : exclusion of chromosome 16 region with linkage … (1991 Jan)
infantile neuronal ceroid lipofuscinosis is not an allelic form of batten disease : exclusion of chromosome 16 region with linkage analyses . infantile neuronal ceroid lipofuscinosis ( CLN1 ) is the form of neuronal ceroid lipofuscinoses ( NCL ) with the earliest onset of symptoms . The locus of the most common form of these disorders , juvenile NCL ( CLN3 ) , has been mapped to chromosome 16 . We report here linkage data of the same region in finnish CLN1 families . Our results indicate that CLN1 is not allelic with CLN3 but represents a different locus , which is not located within about 70 cM in chromosome 16 .
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8314582
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Fine genetic mapping of the batten disease locus ( CLN3 ) by haplotype analysis and demonstration of allelic association with … (1993 Jul)
Fine genetic mapping of the batten disease locus ( CLN3 ) by haplotype analysis and demonstration of allelic association with chromosome 16p microsatellite loci . batten disease , juvenile onset neuronal ceroid lipofuscinosis , is an autosomal recessive neurodegenerative disorder characterized by accumulation of autofluorescent lipopigment in neurons and other cell types . The disease locus ( CLN3 ) has previously been assigned to chromosome 16p . The genetic localization of CLN3 has been refined by analyzing 70 families using a high resolution map of 15 marker loci encompassing the CLN3 region on 16p . crossovers in three maternal meioses allowed localization of CLN3 to the interval between d16s297 and d16s57 . within that interval alleles at three highly polymorphic dinucleotide repeat loci ( d16s288 , d16s298 , d16s299 ) were found to be in strong linkage disequilibrium with CLN3 . analysis of haplotypes suggests that a majority of CLN3 chromosomes have arisen from a single founder mutation .
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9151311
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Structure of the CLN3 gene and predicted structure , location and function of CLN3 protein. (1997 Aug)
structure of the CLN3 gene and predicted structure , location and function of CLN3 protein . The genomic sequence of the human CLN3 gene , which is defective in juvenile onset neuronal ceroid lipofuscinosis ( batten disease ) is being delineated using a variety of methods . A saccharomyces cerevisiae gene , YHC3 ( for yeast homologue to human CLN3 ) , which is highly similar to the human disease gene , has been identified by computer aided homology searching . topology predictions indicate the CLN3 protein contains six transmembrane segments . Most similarity between the human and yeast proteins lies either in the transmembrane segments or along one face of the predicted protein structure .
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9151312
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Strategy for mutation detection in CLN3 : characterisation of two finnish mutations. (1997 Aug)
strategy for mutation detection in CLN3 : characterisation of two finnish mutations . A strategy for detection of mutations in CLN3 , the gene for batten disease or juvenile onset neuronal ceroid lipofuscinosis , has been devised using a technique which detects conformation polymorphisms and direct sequencing of genomic DNA fragments . We define two mutations found uniquely in finnish patients , one a large deletion ( 2 . 8 kb ) , the other a point mutation affecting the 5 splice donor site of an intron .
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9804285
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Rate of accumulation of luxol Fast Blue staining material and mitochondrial ATP synthase subunit 9 in motor neuron degeneration mice. (1999 Jan)
Rate of accumulation of luxol Fast Blue staining material and mitochondrial ATP synthase subunit 9 in motor neuron degeneration mice . The rate of accumulation of luxol Fast Blue staining material in the hippocampus of motor neuron degeneration ( mnd / mnd ) mice , a model of batten disease , was quantitated . stained material increased linearly up to 8 months of age . A quantitative immunoassay was used to measure levels of mitochondrial ATP synthase subunit 9 in brain and liver of mnd / mnd mice . levels of subunit 9 increased progressively throughout the lifespan of mnd / mnd mice reaching levels approximately 5 fold higher than in control animals . The rate of accumulation of subunit 9 is not consistent with any simple complete or partial degradation defect that is constant throughout the animal s life . Two more complicated models are discussed which are consistent with the observed accumulation rate of subunit 9 .
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